Microbial Interpretation for Real Application

MIRA — Microbial Interpretation Platform

Turning Microbial Complexity into Actionable Intelligence

We turn complex microbial data into predictive insights and operational decisions.

Powered byContextual Biological Interpretation™
Deep-Tech Spin-offCNR · University of TusciaTRL 5–6
Microbial intelligence — DNA helix and microbial network
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84.2% CONFIDENCE

Microbiome IntelligenceEnvironmental BiotechnologyIndustrial FermentationAgri & Soil MicrobiomeAquacultureSpace BioContextual Biological Interpretation™Microbiome IntelligenceEnvironmental BiotechnologyIndustrial FermentationAgri & Soil MicrobiomeAquacultureSpace BioContextual Biological Interpretation™Microbiome IntelligenceEnvironmental BiotechnologyIndustrial FermentationAgri & Soil MicrobiomeAquacultureSpace BioContextual Biological Interpretation™
The challenge

The challenge is not generating data.
It is interpreting it.

Modern sequencing generates enormous amounts of microbiological data. Knowing which microorganisms are present is not enough to understand how an ecosystem, an industrial process or a complex biological system is functioning.

The real challenge is transforming data into biological understanding, and biological understanding into decisions. MIRA was created to bridge this gap.

From data to decisions

Beyond sequencing.
Towards biological understanding.

MIRA integrates microbiology, bioinformatics, molecular biology, biotechnology, environmental science and AI to turn biological complexity into decision support.

01

Microbiome Data

Microbiomic, metagenomic and multi-omics data from real systems.

02

Biological Knowledge

Ecological and functional knowledge of microbial communities.

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Core Tech

Contextual Biological Interpretation™

Our core technology: we integrate biological data with environmental and operational context.

03

Actionable Intelligence

Predictive insights, biological indicators, early signals.

04

Decisions

Informed decisions for processes, products and operations.

What MIRA does

We read, interpret and transform the microbiome into actionable intelligence.

// 01

We read microbiomes

We analyze microbiomic, metagenomic and multi-omics data from environmental, industrial, agricultural, human and space systems.

// 02

We interpret biological dynamics

We integrate microbiological data with environmental, ecological and process information to identify the drivers of biological systems.

// 03

We turn it into actionable intelligence

We deliver predictive insights, biological indicators and decision-support tools for research, development and real-world operations.

MIRA Capabilities

From microbial data to decisions.

An integrated set of expertise, bioinformatics tools, interpretation methods and services.

01

Microbiome Profiling & Analysis

Advanced characterization of microbial communities through sequencing, metagenomics and multi-omics.

02

Contextual Biological Interpretation™

Advanced interpretation integrating environmental, ecological and operational context.

03

Biological Intelligence Reporting™

Scientific reports designed to turn complex biological data into actionable knowledge.

04

Predictive Biological Analytics™

AI-assisted analytics for early signals, trends and biological system evolution.

05

Predictive Biological Indicators™

Biological indicators to monitor stability, resilience and performance.

06

Decision Support Systems

Dashboards and intelligent platforms for monitoring, visualization and decision support.

07

Custom R&D Projects

Tailored projects for research, innovation, and product/process validation.

Our Solutions

One platform. Multiple microbiome intelligence solutions.

Every biological process is driven by microorganisms, yet microbiome data are often reduced to taxonomic lists and standard bioinformatics reports.

MIRA transforms microbiome data into actionable biological intelligence. Our proprietary platform integrates advanced microbiome analysis, contextual biological interpretation, AI-assisted analytics and causal inference to reveal how microbial communities influence biological processes and to support better operational decisions.

Rather than simply describing microbial composition, MIRA helps explain why biological systems behave the way they do, what is changing over time and which actions may improve performance.

// The MIRA Intelligence Layer

Every solution in the MIRA Suite is powered by the same proprietary intelligence framework.

Advanced Microbiome Analysis

High-resolution microbiome profiling and ecological characterization.

Contextual Biological Interpretation

Microbiome data are interpreted within the specific biological, environmental and operational context of each project.

Causal AI™

AI-assisted causal analysis helps identify biological drivers, relationships between microbial communities and process performance, and potential causes of system instability.

AI-assisted Dashboard & Visualization™

Interactive dashboards transform complex microbiome datasets into intuitive visualizations, biological KPIs, temporal trends and operational insights, making results immediately accessible for engineers, decision makers and scientists.

Biological Decision Support

Scientifically grounded recommendations support monitoring strategies, troubleshooting, process optimization and evidence-based decision making.

Beyond industrial applications: MIRA supports universities, research institutes and innovation projects by providing advanced microbiome interpretation, AI-assisted analytics and biological expertise that accelerate scientific discovery and technology development.

Explore the MIRA Suite

Bioremediome™
Available

Bioremediome™

Microbiome intelligence for contaminated sites and environmental remediation.

Transform environmental microbiome data into remediation intelligence through biological interpretation, causal AI and AI-assisted decision support.

Applications

  • Contaminated groundwater, soil, sediments
  • Monitored Natural Attenuation (MNA)
  • Biostimulation
  • Bioaugmentation
→ Discover Bioremediome™
Wastewaterome™
Available

Wastewaterome™

Microbiome intelligence for wastewater treatment plants.

Understand, monitor and optimize biological wastewater treatment through microbiome intelligence, predictive analytics and AI-assisted operational support.

Applications

  • Municipal and Industrial WWTPs
  • Activated sludge systems
  • Biological Nutrient Removal (BNR)
  • Anaerobic digestion
  • Bulking & foaming management
  • Resistome monitoring
  • Process troubleshooting
→ Discover Wastewaterome™
Agribiome™
Available

Agribiome™

Microbiome intelligence for sustainable agriculture.

Applications

  • Soil health
  • Plant microbiome
  • Rhizosphere analysis
  • Biostimulants
  • Regenerative agriculture
→ Discover Agribiome™
Aquabiome™
Available

Aquabiome™

Microbiome intelligence for aquatic ecosystems.

Applications

  • Aquaculture
  • Marine ecosystems
  • Freshwater ecosystems
→ Discover Aquabiome™
Industrial Bioprocessome™
Coming Soon

Industrial Bioprocessome™

Microbiome intelligence for industrial biotechnology.

Applications

  • Precision fermentation
  • Industrial fermentation
  • Biomanufacturing
  • Bio-based production
  • Process optimization
→ Discover Industrial Bioprocessome™
Spacebiome™
Available

Spacebiome™

Microbiome intelligence for space research sciences.

Applications

  • Closed-loop habitats
  • Bioregenerative life-support systems
  • Astrobiology
  • Lunar and Martian missions
  • Long-duration human missions
→ Discover Spacebiome™
Research & Innovation
Available

Research & Innovation

Microbiome intelligence for scientific research and innovation.

Support microbiome-driven research projects with advanced bioinformatics, biological interpretation and AI-assisted analytics, helping researchers transform complex sequencing data into meaningful scientific insights.

Applications

  • Academic research
  • Horizon, Life, and other relevant Europe projects
  • Environmental biotechnology
  • Industrial biotechnology
  • Microbiome R&D
  • Proof-of-concept studies
  • Multi-omics integration
  • Collaborative research
→ Discover Research & Innovation
MIRA Human Microbiome Intelligence™
Coming Soon

MIRA Human Microbiome Intelligence™

Microbiome intelligence for human health and wellness.

Extend the power of MIRA's microbiome intelligence platform to human microbiome applications by combining advanced microbiome analysis, contextual biological interpretation, Causal AI™ and AI-assisted analytics. Designed to transform complex microbiome data into actionable biological intelligence, the platform supports researchers, healthcare innovators and industry partners in exploring human-associated microbial ecosystems and unlocking new opportunities for health, wellness and personalized approaches.

Applications

  • Human microbiome profiling
  • Health & wellness
  • Personalized health
  • Microbiome monitoring
  • Research & innovation
  • AI-assisted biological interpretation
  • Data-driven microbiome insights
  • Biological decision support
→ Discover MIRA Human Microbiome Intelligence™
// One Intelligence Framework. Multiple Biological Applications.

Every MIRA product follows the same scientific workflow.

  1. Collect→
  2. Sequence→
  3. Interpret→
  4. Explain→
  5. Predict→
  6. Decide

Microbiome data are integrated with biological expertise, contextual interpretation and AI-assisted analytics to generate:

  • Biological Intelligence
  • Predictive Biological Indicators
  • AI-assisted Dashboards
  • Causal AI Insights
  • Decision Support

This common intelligence layer allows MIRA to address different biological ecosystems while maintaining the same scientific approach and technological foundation. Discover how MIRA transforms microbiome data into actionable biological intelligence.

Who we work with
  • Environmental utilities and water service operators
  • Environmental remediation companies
  • Food & Fermentation industries
  • Agricultural and AgriTech companies
  • Aquaculture operators
  • Environmental monitoring and regulatory bodies
  • Universities and research institutions
  • Space-tech and astrobiology organizations
Why MIRA

Traditional solutions generate data.
MIRA generates understanding and supports decisions.

Traditional approaches

  • Sequencing reports
  • Bioinformatics outputs
  • Static analyses
  • Descriptive data
  • Correlation-based interpretations

MIRA

  • Contextual Biological Interpretation™
  • Predictive biological insights
  • Predictive biological indicators
  • Decision-support systems
  • Early-warning systems
  • Actionable Intelligence
About us

From research to Microbiome Intelligence.

MIRA was born at the intersection of scientific excellence, advanced bioinformatics and artificial intelligence. It integrates expertise from the National Research Council of Italy (CNR), the University of Tuscia and the private innovation ecosystem.

MIRA's mission is to transform microbial complexity into actionable knowledge and decision support for biotech processes, environmental systems and emerging applications.

Team

Research, bioinformatics and AI for real applications.

BM

Bruna Matturro

Co-Founder, CEO & Scientific Strategy Lead

Senior Researcher at IRSA-CNR, environmental biotechnologist with international expertise in environmental microbiology, microbiome analysis and bioremediation. Co-founder of Trireme.

SA

Stefano Amalfitano

Co-Founder, Research Director

Research Director at IRSA-CNR, expert in aquatic microbial ecology, biodiversity and water quality.

AF

Andrea Firrincieli

Co-Founder, Environmental Genomics Lead

Tenure Track Researcher at the University of Tuscia, expert in environmental genomics and sustainable biotechnology.

DC

Davide Corso

Co-Founder, Bioinformatics Lead

Bioinformatician specialized in metagenomics, microbial ecology, environmental genomics and astrobiology.

LL

Livio Livrea

Co-Founder, AI & Digital Strategy Lead

Management engineer and expert in AI, digital transformation and process automation.

Contact

Let's talk.

Tell us about your use case. We'll get back to you within 48 hours.

SedeCNR · Università della Tuscia

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